ELogs/SaadShaikh: Difference between revisions

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== To Do ==
== To Do ==
Last updated 17/03/20


=== High Priority ===
=== High Priority ===
*Investigate extensions to Bortfeld model to incorporate nuclear interactions
*Familiarise with GEANT4
*Run Vivado tutorials with Zybo Z7 board


* Matched tracker and calorimeter data: manual binning for X, Y, Count histograms to find average energy in each bin to then produce 4D histogram.
=== Low Priority ===
* Produce poster for PPRIG of experiment with single-module calorimeter and PRaVDA tracker.
*Set up Eclipse to work with ROOT on Windows partition of DAQ laptop.
*Assist Raffaella in photodiode front-end development of new detector prototype.
*Add information to PBT Wiki:
** Analysis routines to fit Bortfeld and quenched Bortfeld Bragg curves to simulated data and data taken from telescope.
** How to take data with scintillator stack coupled to CMOS sensor.


=== Low Priority ===
==PhD Year 1 Completed==
*Review of literature given by Laurent
*Delivered MSci presentation to PG Physics Society.
*Set up environment in Eclipse for analysis code to fit Bortfeld and quenched Bortfeld Bragg curves to simulated data and data from range telescope.
*Tested analysis routines on simulated and raw data.
*HEP PG courses in term 1: SM1, SM2 & topics in particle physics.
*Medical physics course in term 1: Treatment with Ionising Radiation.
*General improvements to analysis code for ease of use/legibility.
*Analysis of effects of beam spot size on range reconstruction from April 2019 HIT data, also with photodiode approximation.
*Installed GEANT4 locally on MacOS High Sierra and Catalina, successfully ran simulation of range telescope.
*Medical physics courses in term 2: Radiotherapy Physics & Medical Imaging with Ionising Radiation.
 
== Dates 2020 ==


* Investigate y-scale factor correction with chi-square minimisation.
{| class="wikitable"
* Plot x-scale factors against y-scale factors divided by number of counts.
! style="text-align: center;" | Date
* Re-attempt LeCroy scope dead-time measurements.
! style="text-align: center;" | Event
* Start final report in February.
|-
| style="text-align: center;" | 22/06-25/06
| style="text-align: center;" | ENLIGHT
|}


== Completed ==
== MSci Completed ==


* Literature review.
* Literature review.
Line 30: Line 54:
* All runs from first Birmingham put through matching algorithm. Energy spectra, 2D tracker histograms, and 3D XY, XE & YE histograms plotted for all runs (187 plots).
* All runs from first Birmingham put through matching algorithm. Energy spectra, 2D tracker histograms, and 3D XY, XE & YE histograms plotted for all runs (187 plots).
* Wrote code to plot 3D XY histograms, but with the height of bars being the average energy in the bin.
* Wrote code to plot 3D XY histograms, but with the height of bars being the average energy in the bin.
* Improved LeCroy & Caen matching by finding y-scale factor through chi-square minimisation.
* Improved LeCroy & Caen matching by finding y-scale factor through chi-square minimisation or through peak event counting. Peak event counting method best.
 
* Converted energy to range in XYE histogram.
== Dates 2019 ==
* Plotted 2D number density histogram alongside 3D XYRange histogram.
 
* Produced poster for PPRIG 2019 of experiment with single-module calorimeter and PRaVDA tracker.
{| class="wikitable"
* Attended PPRIG 2019.
! style="text-align: center;" | Date
* Completed MSci Final report.
! style="text-align: center;" | Event
* Delivered presentation on project.
|-
* Attended PTCOG 2019.
| style="text-align: center;" | 07/02 - 08/02
| style="text-align: center;" | PPRIG
|-
| style="text-align: center;" | 11/02 - 12/02
| style="text-align: center;" | UCL PhD Interviews
|-
| style="text-align: center;" | 22/03
| style="text-align: center;" | Final Report Deadline
|-
| style="text-align: center;" | 03/06-07/06
| style="text-align: center;" | MSci Presentation Week
|}

Revision as of 12:27, 18 March 2020

Electronic Log for Saad Shaikh

To Do

Last updated 17/03/20

High Priority

  • Investigate extensions to Bortfeld model to incorporate nuclear interactions
  • Familiarise with GEANT4
  • Run Vivado tutorials with Zybo Z7 board

Low Priority

  • Set up Eclipse to work with ROOT on Windows partition of DAQ laptop.
  • Assist Raffaella in photodiode front-end development of new detector prototype.
  • Add information to PBT Wiki:
    • Analysis routines to fit Bortfeld and quenched Bortfeld Bragg curves to simulated data and data taken from telescope.
    • How to take data with scintillator stack coupled to CMOS sensor.

PhD Year 1 Completed

  • Review of literature given by Laurent
  • Delivered MSci presentation to PG Physics Society.
  • Set up environment in Eclipse for analysis code to fit Bortfeld and quenched Bortfeld Bragg curves to simulated data and data from range telescope.
  • Tested analysis routines on simulated and raw data.
  • HEP PG courses in term 1: SM1, SM2 & topics in particle physics.
  • Medical physics course in term 1: Treatment with Ionising Radiation.
  • General improvements to analysis code for ease of use/legibility.
  • Analysis of effects of beam spot size on range reconstruction from April 2019 HIT data, also with photodiode approximation.
  • Installed GEANT4 locally on MacOS High Sierra and Catalina, successfully ran simulation of range telescope.
  • Medical physics courses in term 2: Radiotherapy Physics & Medical Imaging with Ionising Radiation.

Dates 2020

Date Event
22/06-25/06 ENLIGHT

MSci Completed

  • Literature review.
  • First Birmingham experimental run.
  • Wrote code to load and plot Caen digitiser data in histograms.
  • Overhauled LeCroy data analysis routines: (short region) double baseline sigma testing, dynamic integration window allocation, empty acquisition checks.
  • Wrote code to scale and plot LeCroy & Caen data onto single plot, using approximate x and y-scale factors.
  • Wrote code to load and plot PRaVDA data in 2D histograms.
  • Wrote code to correlate tracker and calorimeter measurements, to produce a list of events with X, Y, E coordinates.
  • Wrote code to plot matched events into various 3D histograms: XY, XE, YE.
  • Progress report.
  • Progress interview.
  • Improved LeCroy & Caen matching by finding x-scale factor through chi-square minimisation.
  • All runs from first Birmingham put through matching algorithm. Energy spectra, 2D tracker histograms, and 3D XY, XE & YE histograms plotted for all runs (187 plots).
  • Wrote code to plot 3D XY histograms, but with the height of bars being the average energy in the bin.
  • Improved LeCroy & Caen matching by finding y-scale factor through chi-square minimisation or through peak event counting. Peak event counting method best.
  • Converted energy to range in XYE histogram.
  • Plotted 2D number density histogram alongside 3D XYRange histogram.
  • Produced poster for PPRIG 2019 of experiment with single-module calorimeter and PRaVDA tracker.
  • Attended PPRIG 2019.
  • Completed MSci Final report.
  • Delivered presentation on project.
  • Attended PTCOG 2019.