Clatterbridge - Revision history

RaffaellaRadogna at 07:46, 14 August 2020

2020-08-14T07:46:46Z

RaffaellaRadogna at 07:43, 14 August 2020

2020-08-14T07:43:52Z

← Older revision		Revision as of 07:43, 14 August 2020
Line 1:		Line 1:
	[[/Geant4 Geant4]]		[[/Geant4 \| Geant4]]
	This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.		This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.

RaffaellaRadogna at 07:42, 14 August 2020

2020-08-14T07:42:57Z

← Older revision		Revision as of 07:42, 14 August 2020
Line 1:		Line 1:
	[/Geant4 Geant4]		[[/Geant4 Geant4]]
	This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.		This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.

RaffaellaRadogna at 07:42, 14 August 2020

2020-08-14T07:42:41Z

← Older revision		Revision as of 07:42, 14 August 2020
Line 1:		Line 1:
	[/Geant4\|Geant4]		[/Geant4 Geant4]
	This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.		This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.

RaffaellaRadogna at 07:42, 14 August 2020

2020-08-14T07:42:23Z

← Older revision		Revision as of 07:42, 14 August 2020
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	~~=== [~~[/Geant4\|Geant4]~~] ===~~		[/Geant4\|Geant4]
	This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.		This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.

RaffaellaRadogna at 07:41, 14 August 2020

2020-08-14T07:41:12Z

← Older revision		Revision as of 07:41, 14 August 2020
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			=== [[/Geant4\|Geant4]] ===
	This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.		This simulation is a model of the monoenergetic 62.5 MeV proton beam at the [http://www.clatterbridgecc.nhs.uk/patients/treatment-and-support/proton-therapy Clatterbridge Cancer Centre] as it traverses the components of the beamline and finally hits a volume of water. The simulation was built on the example in <code>examples/extended/electromagnetic/TestEm7</code> supplied with the Geant4 package and detailed [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/Tutorials/Basic/Monoenergetic_Proton_Pencil_Beam here]. The physics list used is QGSP_BIC_HP, the standard for simulating clinical proton beams.

MatthieuHentz: /* Building the simulation */

2018-03-28T16:39:35Z

Building the simulation

← Older revision		Revision as of 16:39, 28 March 2018
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	[username@pc1XX build]$ cmake -DGeant4_DIR=/unix/pbt/software/dev ../source		[username@pc1XX build]$ cmake -DGeant4_DIR=/unix/pbt/software/dev ../source
	[username@pc1XX build]$ make -j4		[username@pc1XX build]$ make -j4
			</pre>

			When cloning the repository, the executable scripts will be created without execute permissions. These must be given using
			<pre>
			[username@pc1XX build]$ chmod 755 *.sh
	</pre>		</pre>

MatthieuHentz: /* Build the simulation */

2018-03-13T15:54:29Z

Build the simulation

← Older revision		Revision as of 15:54, 13 March 2018
Line 229:		Line 229:
	= Running simulations =		= Running simulations =

	=== ~~Build~~ the simulation ===		=== Building the simulation ===
	To access a Linux desktop PC running Scientific Linux 6, [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/UCL_HEP_Cluster follow the instructions here]. Once access has been established, follow the instructions below to copy the simulation files to your directory:		To access a Linux desktop PC running Scientific Linux 6, [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/UCL_HEP_Cluster follow the instructions here]. Once access has been established, follow the instructions below to copy the simulation files to your directory:
	<pre>		<pre>

MatthieuHentz: /* Build the simulation */

2018-03-13T15:54:08Z

Build the simulation

← Older revision		Revision as of 15:54, 13 March 2018
Line 231:		Line 231:
	=== Build the simulation ===		=== Build the simulation ===
	To access a Linux desktop PC running Scientific Linux 6, [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/UCL_HEP_Cluster follow the instructions here]. Once access has been established, follow the instructions below to copy the simulation files to your directory:		To access a Linux desktop PC running Scientific Linux 6, [http://www.hep.ucl.ac.uk/pbt/wiki/Software/Geant4/UCL_HEP_Cluster follow the instructions here]. Once access has been established, follow the instructions below to copy the simulation files to your directory:
			<pre>
			[username@pc1XX ~]$ mkdir Clatterbridge_sim
			[username@pc1XX ~]$ cd Clatterbridge_sim
			[username@pc1XX Clatterbridge_sim]$ cp -r /unix/pbt/users/mhentz/Clatterbridge_sim/source .
			[username@pc1XX Clatterbridge_sim]$ mkdir build
			[username@pc1XX Clatterbridge_sim]$ cd build
			[username@pc1XX build]$ /unix/pbt/software/scripts/pbt.sh
			[username@pc1XX build]$ cmake -DGeant4_DIR=/unix/pbt/software/dev ../source
			[username@pc1XX build]$ make -j4
			</pre>

			Alternatively, the simulation can be cloned from the [https://github.com/mhentz/Clatterbridge_sim.git GitHub repository] as follows:
	<pre>		<pre>
	[username@pc1XX ~]$ ~~mkdir sim~~		[username@pc1XX ~]$ git clone https://github.com/mhentz/Clatterbridge_sim.git
	[username@pc1XX ~]$ cd ~~sim~~		[username@pc1XX ~]$ cd Clatterbridge_sim
	[username@pc1XX ~~sim]$ cp -r /unix/pbt/users/mhentz/~~Clatterbridge_sim~~/source .~~		[username@pc1XX Clatterbridge_sim]$ mkdir build
	~~[username@pc1XX sim~~]$ mkdir build		[username@pc1XX Clatterbridge_sim]$ cd build
	[username@pc1XX ~~sim~~]$ cd build
	[username@pc1XX build]$ /unix/pbt/software/scripts/pbt.sh		[username@pc1XX build]$ /unix/pbt/software/scripts/pbt.sh
	[username@pc1XX build]$ cmake -DGeant4_DIR=/unix/pbt/software/dev ../source		[username@pc1XX build]$ cmake -DGeant4_DIR=/unix/pbt/software/dev ../source

MatthieuHentz: /* Files */

2018-03-13T12:15:56Z

Files

← Older revision		Revision as of 12:15, 13 March 2018
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	[[Clatterbridge files\|List of source files.]]		[[Clatterbridge files\|List of source files.]]

	Click here to download source ~~files~~ as a zip: [http://www.hep.ucl.ac.uk/pbt/wikiData/code/Clatterbridge_sim.zip download]		Click here to download source as a zip: [http://www.hep.ucl.ac.uk/pbt/wikiData/code/Clatterbridge_sim.zip download]